Results for "depth"
Top-level pages
List of In-silico Binding Site Prediction Tools
...bio-iitd.res.in/dock/ActiveSite_new.jsp Active Site Prediction of Protein server computes the cavities in a given protein. DEPTH: http://mspc.bii.a-star.edu.sg/tankp/run_depth.html Depth measures the close...3750 days ago
Commercial and public next-gen-seq (NGS) software
...rowsing and analysis of genome sequence data. LookSeq supports multiple sequencing technologies, alignment sources, and viewing modes; low or high-depth read pileups; and easy visual...3525 days ago
A guide for complete R beginners !
...Getting More Help Project Home page http://www.r-project.org/ Check out the ‘introduction to R’, which is a much more in depth guide . Also R has a built-i...3367 days ago
Software packages for next gen sequence analysis
...rowsing and analysis of genome sequence data. LookSeq supports multiple sequencing technologies, alignment sources, and viewing modes; low or high-depth read pileups; and easy visual...3248 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
...euploid tumor samples using whole genome sequencing data” Input: depth file generated by DFExtract a...put: VCF RVD2 Description: sensitive, variant detection for low-depth targeted NGS data; python mod...2915 days ago
- ...of base pairs that are sequenced in an individual sequence read. read-depth: the number of sequence reads that pile up at the same genomic location. For example, 30X read-depth coverage indicates that the g...
2875 days ago
Genome Assembly Tools and Software - PART1 !!
...to assemble virus genomes that have no repeat sequences, using Illumina read pairs sequenced from mixed populations at extremely high and variable depth. SFA-SPA 0.2.1 – A...2692 days ago
Quick next generation sequencing (NGS) terms definition
...o indicate a potential SV or a short insertion or deletion (indel).read depth: number of reads that map within a region of the genome. Overall genome-wide read depth is also referred to as depth...2528 days ago
List of visualization tools for genome alignments
...f?SGWID=0-0-45-1487072-p176815501 LookSeq Web-based visualization of sequences derived from multiple sequencing technologies. Low- or high-depth read pileups and easy visuali...2290 days ago
Python learning resources for bioinformatics and computational biologist !
...nbsp;(Just fill the fields with any values) Porting to Python 3: An In-Depth Guide (2.6 - 2.x & 3...p;(3.2) Snake Wrangling For Kids (3.x) Suporting Python 3: An In-Depth Guide (2.6 - 2.x & 3...2261 days ago
