3028 days ago
CANU: Assembling Large Genomes with Single-Molecule Sequencing and Locality Sensitive Hashing.
...re is currently alpha level, feel free to use and report issues encountered. Canu is a hierachical assembly pipeline which runs in four steps: Detect overlaps in high-noise sequen...2927 days ago
MEDEA: Comparative Genomic Visualization with Adobe Flash
...grows larger, the need to understand, compare, and contrast the data becomes increasingly important. Using the power of the human visual system to detect trends and spot outliers is n...2944 days ago
YASS :: genomic similarity search tool
...e most of the heuristic pairwise local alignment tools for DNA sequences (FASTA, BLAST, PATTERNHUNTER, BLASTZ/LASTZ, LAST ...), YASS uses seeds to detect potential similarity regions,...2938 days ago
2930 days ago
SATSUMA : Highly sensitive whole-genome synteny alignments.
...ng genes, non-coding genes, or neutral sequences. Satsuma does not require any pre-processing, such as repeat masking, since it will automatically detect ambiguous mappings. Satsuma...2927 days ago
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