Results for "dna"
Top-level pages
List of bioinformatics open source projects/software.
...h other bioinformatics tools GENtle http://directory.fsf.org/wiki/GENtle An equivalent to the proprietary Vector NTI, a tool to analyze and edit DNA sequence files Integrated Ge...3772 days ago
List of generic simulation software/tools/resource with brief description and homepage !!!
...signed to simulate the evolution of recombinant DNA sequences in continuous time...ulation program that simulates highly divergent DNA sequences and protein superfa...ndex.shtmlMySSP A program for the simulation of DNA sequence evolution across a p...3752 days ago
List of In-silico Binding Site Prediction Tools
...protein surface. The algorithm has been used successfully for the detection of protein–protein, protein–small ligand and protein–DNA binding sites. Availability:...3759 days ago
Next generation sequencing in R or bioconductor environment
...allows to search a set of unaligned DNA sequences for a shared motif...regions as input and outputs short DNA sequences that are overrepres...eak calling package for identifying DNA binding sites of proteins in...RANGE TopHat SpliceMap SplitSeek DNA-Methylation Data Analysis...3640 days ago
Commercial and public next-gen-seq (NGS) software
...workflows for: ChIP-Seq, RNA-Seq, DNA-Seq, DNA Methylation, Gene Expression,...ort read aligner. It aligns short DNA sequences (reads) to the huma...dly finding near exact matches in DNA or protein databases using a...of the Arabidopsis Genome Reveals DNA Methylation Patterning" Natur...3534 days ago
Apps for Busy Bioinformatics Researchers !!!
DNAApp: DNAApp: for iPhone/iPad This is an iOS a...llows for the opening and analysis of DNA sequencing files - ab1. It in...ore @ https://itunes.apple.com/us/app/dnaapp/id854944694?mt=8 DNAApp:...llows for the opening and analysis of DNA sequencing files - ab1. It in...3557 days ago
List of Biotechnology Research Laboratory, University, and Centre in India
DEPARTMENT OF BIOTECHNOLOGY Centre For DNA Fingerprinting And Diagnostics (CDFD), Hyderabad ( Institute of Bioresources and Sustainable Development (IBSD), Imphal, Manipu...2586 days ago
Software packages for next gen sequence analysis
...ing and analysis pipeline for short DNA sequences produced on a Illum...short read aligner. It aligns short DNA sequences (reads) to the huma...pidly finding near exact matches in DNA or protein databases using a...for perfect 3'-most k-mers using a DNA prefix tree. Authors are Ren&...3258 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
...r-Father-Child Trio analysis, DNA Copy number including allele...lications (RNA-Seq, ChIP-Seq, DNA-Seq, etc.) Very fast - get a...RADIA Description: RNA and DNA Integrated Analysis for Somat...signal, predicted algorithm, cDNA position and interpretation...2924 days ago
Tools for Searching Repeats And Palindromic Sequences
...uplications of simple sets of DNA bases (typically 1-5bp) such...ce of a reverse transcriptase.DNA TransposonsRetrovirus Retrotr...nscription by RNA polymerase, DNA strands have upstream and dow...ucleases) designed to cut the DNA strands at specific locations...2226 days ago
