Many-Core Engine (MCE) for Perl example
...f MCE::Stream. This model, introduced in 1.506, allows one to pass data from one sub-task into the next transparently. MCE::Stream Provides an efficient parallel implementation for c...2665 days ago
fineSTRUCTURE v2 & GLOBETROTTER
...e misled by the punchy name! About Chromosome Painting Painting is an efficient way of identifying important...ype information from dense genotype data. It describes ancestry in an efficient way suitable for a range of f...2652 days ago
2649 days ago
LoRDEC: a hybrid error correction program for long, PacBio reads
...detection of region of similarity with other sequences, for aligning them to the contigs of an assembly, etc. Why is LoRDEC different? It is efficient and can process large read da...2596 days ago
2587 days ago
AVID: A Global Alignment Program
A new global alignment method called AVID. The method is designed to be fast, memory efficient, and practical for sequence alignments of large genomic regions up to megabases long. We...2552 days ago
Genome Annotation Transfer Utility (GATU)
Genome Annotation Transfer Utility (GATU) was designed to facilitate quick, efficient annotation of similar genomes using genomes that have already been annotated. For example, wheneve...2547 days ago
BEDOPS v2.4.26: high-performance genomic feature operations
...udies — mostly with regard to overlap and proximity relationships between data sets. It aims to be scalable and flexible, facilitating the efficient and accurate analysis and man...2533 days ago
2520 days ago
Mulan: MUltiple sequence Local AligNment and conservation visualization tool
Mulan performs multiple (2 or more) sequence alignments with an efficient and rapid "full local" alignment strategy that ensures a recapitulation of evolutionary sequence rearrangement...2495 days ago