RASTtk : algorithm for building custom annotation pipelines and annotating batches of genomes
...a version of RAST that is both customizable and extensible. In this paper, we describe the RAST tool kit (RASTtk), a modular version of RAST that enables researchers to build custom a...2924 days ago
2863 days ago
2813 days ago
OPERA : Optimal Paired-End Read Assembler
...oved corrected N50 and reduced the number of scaffolding errors. Furthermore, our latest release contains the wrapper script OPERA-long-read that enables scaffolding with long-reads f...2789 days ago
2747 days ago
Prodigal (Prokaryotic Dynamic Programming Genefinding Algorithm)
...entally verified Ecogene data set (except those containing introns). It possesses a very sophisticated ribosomal binding site scoring system that enables it to locate the translation...2678 days ago
2611 days ago
Many-Core Engine (MCE) for Perl example
...e module. MCE::Queue exchanges data via the core engine to enable queuing to work for both children (spawned from fork) and threads. MCE::Relay Enables workers to receive and pass o...2645 days ago
Strand Life Sciences announces the release of Strand NGS v3.1 at ASHG 2017
...uitive interface allows the specification of custom UMI protocols. “For liquid biopsies and low-grade FFPE samples, UMI support in DNA-Seq enables the detection of somatic vari...2381 days ago
2614 days ago