RASTtk : algorithm for building custom annotation pipelines and annotating batches of genomes
...a version of RAST that is both customizable and extensible. In this paper, we describe the RAST tool kit (RASTtk), a modular version of RAST that enables researchers to build custom a...2941 days ago
2880 days ago
2830 days ago
OPERA : Optimal Paired-End Read Assembler
...oved corrected N50 and reduced the number of scaffolding errors. Furthermore, our latest release contains the wrapper script OPERA-long-read that enables scaffolding with long-reads f...2806 days ago
2764 days ago
Prodigal (Prokaryotic Dynamic Programming Genefinding Algorithm)
...entally verified Ecogene data set (except those containing introns). It possesses a very sophisticated ribosomal binding site scoring system that enables it to locate the translation...2696 days ago
2628 days ago
Many-Core Engine (MCE) for Perl example
...e module. MCE::Queue exchanges data via the core engine to enable queuing to work for both children (spawned from fork) and threads. MCE::Relay Enables workers to receive and pass o...2662 days ago
Strand Life Sciences announces the release of Strand NGS v3.1 at ASHG 2017
...uitive interface allows the specification of custom UMI protocols. “For liquid biopsies and low-grade FFPE samples, UMI support in DNA-Seq enables the detection of somatic vari...2398 days ago
2631 days ago