7th International Conference on Bioinformatics and Computational Biology (BICoB)
...stering, function prediction, motif discovery, functional site recognition in protein, RNA and DNA sequences. Phylogenetics: Phylogeny estimation, models of evolution, compara...3499 days ago
Kraken: ultrafast metagenomic sequence classification using exact alignments
...omputationally expensive, forcing researchers to use faster abundance estimation programs, which only classify...09 times faster than Megablast and 11 times faster than the abundance estimation program MetaPhlAn. Kraken is...2869 days ago
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ConPADE: Genome Assembly Ploidy Estimation from Next-Generation Sequencing Data
ConPADE (Contig Ploidy and Allele Dosage Estimation), a probabilistic method that estimates the ploidy of any...how applicability of the method for variant calling and allele dosage estimation. Results for simulated and re...2627 days ago
LIBSVM -- A Library for Support Vector Machines
...M is an integrated software for support vector classification, (C-SVC, nu-SVC), regression (epsilon-SVR, nu-SVR) and distribution estimation (one-class SVM). It supports...2468 days ago
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Mash: fast genome and metagenome distance estimation using MinHash
Mash is normally distributed as a dependency-free binary for Linux or OSX (see https://github.com/marbl/Mash/releases). This source distribution is intended for othe...2336 days ago
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