Bioinformatics Courses Around the World
Bioinformatics Courses around the world Here is the list Bioinformatics courses offered around the world. Reasons for constructing this page are: To show the exten...3948 days ago
Next generation sequencing in R or bioconductor environment
...peaks, obtain enriched Gene Ontology (GO) terms, find the nearest gene, exon, miRNA or custom features suc...via Rsamtools) and associating them with genomic feature ranges, such as exons or genes. This way one can q...3629 days ago
Commercial and public next-gen-seq (NGS) software
...DNA Methylation, Gene Expression, Exon, miRNA Expression, Copy Numbe...J. Cox for the Solexa 1G machine. Exonerate - Various forms of pairw...Solexa reads. GMAP is free, though.Exonerate (http://www.ebi.ac.uk/~g...novo gene models. First, candidate exons are built directly from the...3523 days ago
Genome Assembly Tools and Software - PART1 !!
...ap assembled contigs to known transcripts, currently supporting Blat and Exonerate contig-to-genome aligners. It identifies novel splicing events like exon-skipping, novel exons, retain...2690 days ago
Bioinformatics tools to detect horizontal gene transfer (HGT) in genomes
Horizontal gene transfer (HGT), the “non-sexual movement of genetic material between two organisms” , is relatively common in prokaryotes and single-c...855 days ago