Download mutliple fasta file from NCBI in one GO!!
...then use three ways mentioned in bookmark link to extract/download all fasta sequences in single click giv...\S+)/){$c=$i{$1}}$c?print:chomp;$i{$_}=1 if @ARGV' GIs.txt >sequence.fasta where GIs.txt contains ...3922 days ago
Barrnap: Bacterial ribosomal RNA predictor
...genes in genomes. It supports bacteria (5S,23S,16S), archaea (5S,5.8S,23S,16S), mitochondria (12S,16S) and eukaryotes (5S,5.8S,28S,18S). It takes FASTA DNA sequence as input, and wr...2562 days ago
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RNA-Seq De novo Assembly Using Trinity
...: Trinity --seqType fq --left reads_1.fq --right reads_2.fq --CPU 6 --max_memory 20G Find assembled transcripts as: 'trinity_out_dir/Trinity.fasta'2977 days ago
REAPR: a universal tool for genome assembly evaluation
...rts mis-assemblies and other warnings, and produces a new broken assembly based on the error calls. The software requires as input an assembly in FASTA format and paired reads mappe...2962 days ago
YASS :: genomic similarity search tool
...is a genomic similarity search tool, for nucleic (DNA/RNA) sequences in fasta or plain text format (it prod...most of the heuristic pairwise local alignment tools for DNA sequences (FASTA, BLAST, PATTERNHUNTER, BLASTZ...2937 days ago
Bioinformatics tools and software
.... PREFAB >Protein Reference Alignment Database. MSA benchmark collection >Selected multiple alignment benchmarks in a standardized FASTA format.2873 days ago
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