Create genome scaffolding with Perl
...$lSeq) = ($lSeq, $sSeq); } my $doRC = ($strand eq "-"); if($doRC){ if ($shortTarget) { # target sequence is assumed to be forward strand $lSeq = rc(...2321 days ago
2088 days ago
Perl script for six frame translation !
...3, -1, -2, -3); foreach my $frame (@frames) { my $translated_seq = translate_frame($sequence, $frame); my $frame_type = $frame > 0 ? "Forward" : "Reverse"; print "Fra...107 days ago
Python script for six frame translation of sequences !
...D: {record.id}") for frame in range(1, 7): protein_sequence = translate_frame(record.seq, frame) frame_type = "Forward" if frame > 0 else "Reverse"...107 days ago