Results for "gene"
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Ensembl comparative genomics resources
...nservation scores and constrained elements are obtained. Gene alignments are used to define Ensembl Protein Families, GeneTrees and homologies for both...cluding synteny displays, collapsible gene tree plots, a gene family locator and different...2983 days ago
RNA-Seq De novo Assembly Using Trinity
...ng the transcriptional complexity at at a given gene or locus, and then processes...tease apart transcripts derived from paralogous genes. Briefly, the process works...part transcripts that corresponds to paralogous genes. More at https://github...2960 days ago
HOMER: Software for motif discovery and next-gen sequencing analysis
...r own data or from public sources) Checking sequence quality, trimming, general sequence manipulation Map...ts (microarray or RNA-Seq) Microarray Basic analysis of Affymetrix Gene Expression Arrays using R/Bio...2926 days ago
- ...compatible with common network analysis platforms. AccNET collects phylogenetic and functional information...pective of organism organization through elements acquired by horizontal gene transfers and not constricted...
2762 days ago
- ...for quantitative assessment of genome assembly, gene set, and transcriptome comple...ased on evolutionarily informed expectations of gene content from near-universal s...phylogenomics studies, and the annotated BUSCO gene models built during genome as...
2911 days ago
- A free extensible and customizable gene annotation portal, a complete resource for learning about gene and protein function. http://biogps.org/#goto=welcome
2899 days ago
- ...s and visulization of functional profiles for genes and gene clustersBioconductor version:...isualize functional profiles (GO and KEGG) of gene and gene clusters.Author: Gua...package for comparing biological themes among gene clusters.” OMICS: A Jou...
2874 days ago
- Horizontal gene transfer (HGT), the transfer of genetic material between organisms, is crucial for genetic innovation and the evoluti...o measure the divergence of a gene from its native genomic envir...detecting all newly acquired genes in a particular strain. Ava...
2869 days ago
- ...ith each other via chromatin folding and affect gene expression levels. Genomic te...etween DNA regions, e.g., ChIA-PET and HiC, can generate genome-wide maps of inter...tasets, 3) querying network components based on gene name or chromosome location,...
2863 days ago
- ...rrently CSBB provides 13 modules focused on analytical tasks like performing upper-quantile normalization on expression data or convert genome wide gene expression to z-scores when c...
2861 days ago
