Ensembl comparative genomics resources
The Ensembl comparative genomics resources are one such reference set that facil...hensive and reproducible analysis of chordate genome data. Ensembl computes pairwise and multiple whole-genome alig...e species by other projects including Ensembl Genomes...2982 days ago
Pattern Searching in a Single Genome
Pattern searching holds much importance for biologists , for the understanding of DNA ( and its functionality) can be more than a matter of satisfying curiosity , but al...2975 days ago
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PAired-eND Assembler for DNA sequences
PANDASEQ is a program to align Illumina reads, optionally with PCR primers embedded in the sequence, and reconstruct an overlapping sequence. More at https://github.com/neufeld/pandaseq2945 days ago
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RACA: Reference-Assisted Chromosome Assembly
Rreference-Assisted Chromosome Assembly (RACA), an algorithm to reliably order and orient sequen...generated by NGS and assemblers into longer chromosomal fragments using comparative genome i...2945 days ago
QUAST: quality assessment tool for genome assemblies
QUAST evaluates genome assemblies. For metagenomes, please see MetaQUAST project.It can works both with and without a given reference genome.T...2944 days ago
REAPR: a universal tool for genome assembly evaluation
REAPR is a tool that evaluates the accuracy of a genome assembly using mapped paired end reads, without the use of a reference genome f...2944 days ago