3927 days ago
Bioinformatics and Sequencing Courses and Workshops
Swiss Institute of Bioinformatics (SIB) organises lots of bioinformatics courses covering wide range of topics: http://www.isb-sib.ch/education/training-courses.html Ca...3919 days ago
Useful Publications and Websites for Deep Sequencing Data Analysis
...approach to detect multiple modes of protein–DNA binding from genome-wide ChIP data. Narlikar, Nucleic...ature Biotechnology 30:226 - 229, 2012 Publisher Website, Home Page Genome-wide LORE1 retrotransposon mutagen...3792 days ago
List of bioinformatics open source projects/software.
Open source software is software that can be freely used, changed, and shared (in modified or unmodified form) by anyone. Open source software is made by many people, and...3770 days ago
List of generic simulation software/tools/resource with brief description and homepage !!!
...re variant simulation and analysis tool http://code.google.com/p/simrare/simuGWAS A forward-time simulator that simulates realistic samples for genome-wide association studies. http://s...3750 days ago
Next generation sequencing in R or bioconductor environment
There are many R software and bioconductor packages for NGS data analysis, some of them are as follows Biostrings The Biostrings package from Bioconductor provides an a...3637 days ago
Commercial and public next-gen-seq (NGS) software
...nce. By Rozowsky J et al. C/Perl. QuEST - Quantitative Enrichment of Sequence Tags. Sidow and Myers Labs at Stanford. From the 2008 publication Genome-wide analysis of transcription fac...3532 days ago
Using Interval Trees to Query Genome Annotations by Position
To work on query related to overlapping genomic features: use IntervalTree python pkg http://informatics.malariagen.net/2011/07/07/using-interval-trees-to-query-genome-a...3562 days ago
Apps for Busy Bioinformatics Researchers !!!
DNAApp: DNAApp: for iPhone/iPad This is an iOS app that allows for the opening and analysis of DNA sequencing files - ab1. It includes handy tools such as "Reverse Comp...3554 days ago
List of Biotechnology Research Laboratory, University, and Centre in India
DEPARTMENT OF BIOTECHNOLOGY Centre For DNA Fingerprinting And Diagnostics (CDFD), Hyderabad ( Institute of Bioresources and Sustainable Development (IBSD), Imp...2584 days ago