Results for "gff"
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...gt; hg19 (GRCh37), Mouse mm9 (MGSCv37) <> mm10 (GRCm38)). It supports most commonly used file formats including SAM/BAM, Wiggle/BigWig, BED, GFF/GTF, VCF. CrossMap is design...3004 days ago
- ...7), Mouse mm9 (MGSCv37) <> mm10 (GRCm38)). It supports most commonly used file formats including SAM/BAM, Wiggle/BigWig, BED, GFF/GTF, VCF. CrossMap is design...
2795 days ago
- ...d to explore conservation of synteny, in the context of the entire sequences and their annotation. It can read complete EMBL, GENBANK and GFF entries or sequences in FASTA...
2793 days ago
- ...rge, count, complement, and shuffle genomic intervals from multiple files in widely-used genomic file formats such as BAM, BED, GFF/GTF, VCF. While each individu...
2623 days ago
- BioPerl modules Bio::Graphics + Bio::DB:GFF and example scripts. It can draw some of the (but not all) feature types GBrowse can draw. This script should contain...
2501 days ago
- .... Key Features Circleator... Builds on BioPerl and the input file formats that it supports, including: GenBank flat files, GFF, FASTA Accepts a number...
2501 days ago
Biological file format tutorial
...ference between different formats. Please refer user manual or other information resources on web for more details. FASTA FASTQ SAM BAM VCF GFF GTF...2326 days ago
CrossMap: a program for convenient conversion of genome coordinates
...; hg19 (GRCh37), Mouse mm9 (MGSCv37) <> mm10 (GRCm38)). It supports most commonly used file formats including SAM/BAM, Wiggle/BigWig, BED, GFF/GTF, VCF. CrossMap is desi...2162 days ago
ZENBU: a collaborative, omics data integration and interactive visualization system
...eractive linked-visualizations and is able to make many-views from the same primary sequence alignment data which users can uploaded from BAM, BED, GFF and tab-text files. Plea...1943 days ago
RaGOO: Fast Reference-Guided Scaffolding of Genome Assembly Contigs
...less than a minute and the whole pipeline with SV calling takes ~2 minutes. Intact ordering and orienting of contigs. Chimeric contig correction GFF lift-over Structural variant...1840 days ago
