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Results for "
gff
"
Wire posts
Jit
@jit.aber
Count the number of "pattern" occurrence in a file grep -o 'pattern' anc.annots.
gff
| wc -l #Linux #grep #Count #Number #Occurrence
3632 days ago
Jit
@jit.aber
Plotting alignment genome.crg.es/software/
gff
tools/
GFF
2APLOT.html #Alignment #Plot #Genome #
gff
#
gff
tools
2602 days ago
BioJoker
@biojoker
Print the lqst line of the file zith Perl. $ perl -ne 'END {print $last} $last= $_ if /\S/' blocks_coords.
gff
#Last #Line #Perl
1771 days ago
biogeek
@biogeek
(grep ^"#" in.
gff
; grep -v ^"#" in.
gff
| sort -k1,1 -k4,4n) | bgzip > sorted.
gff
.gz; tabix -p
gff
sorted.
gff
.gz; #GATK
1552 days ago
Jit
@jit.aber
Easily visualise regions of your
GFF
file https://fmalmeida.github.io/posts/plot-dna-features-tutorial/ #
GFF
#Visualize
1247 days ago
Neelam Jha
@neelam
Genbank2
GFF
https://github.com/bioperl/bioperl-live/blob/master/bin/bp_genbank2
gff
3 #Genbank #
GFF
650 days ago