Results for "human reference genome"
Bookmarks
Recent technological progress has greatly facilitated de novo genome sequencing. However, de...on and quality assessment of de novo genome assemblies Citation This so...on and quality assessment of de novo genome assemblies. In brief, our sc...2823 days ago
- A probabilistic framework for structural variant discovery. Ryan M Layer, Colby Chiang...l. 2014. "LUMPY: a Probabilistic Framework for Structural Variant Discovery." Genome Biology 15 (6): R84. doi...
2822 days ago
- In this exercise, a previously annotated gene will be used t...approaches. GRAIL, GENSCAN, geneid, FGENESH, GenomeScan, GrailEXP and GENEWISE wi...prediction of initial exons in most cases. http://genome.crg.es/courses/Bioinformatics...
2821 days ago
- gKaKs is a codon-based genome-level Ka/Ks computation pipeline developed and...tes (Ka, Ks and Ka/Ks) between a well-annotated genome and a non-annotated genome or...et. It is especially useful for newly sequenced genomes that have not been well anno...
2818 days ago
Comparative genomics educational material and papers bookmarks
Alignment of the porcine genome against seven other mammalian genomes (Supplementary Information) identified homologous synteny b...hared by pigs and cattle) were detected using the pig and human genomes as a reference, respectively.2745 days ago
Method in Comparative genomics !!
...duplicated genes in the yeast genome. The remaining ambiguities in...used this test to revisit the genome of S. cerevisiae, reducing th...motif discovery. Based on the genome-wide conservation patterns of...complex genomes like that of human....2745 days ago
- Redundans pipeline assists an assembly of heterozygous genomes.Program takes as input ...ns scaffolded homozygous genome assembly, that should be ...the gaps resulting from genome assembly or scaffolding ...ptop for small-to-medium size genomes flexible toward many s...
2815 days ago
OPERA : Optimal Paired-End Read Assembler
OPERA (Optimal Paired-End Read Assembler) is a...ate contigs/scaffolds assembled in a genome assembly project, in a proces...are important for scaffolding large genomes (multi-library support, bett...and algorithms is available at Genome Biology. We look forward to g...2807 days ago
- Fermi is a de novo assembler with a particular focus on assembling Illumina short sequence reads from a mammal-sized genome. In addition to the role of a...
2807 days ago
- These tutorials are written for hundreds of bioinformatician...n the world of sequencing. Merely five years back, genome sequencing of higher eukaryotes used to be very expensive endeavor. To get a genome of interest sequenced, hundre...
2811 days ago
