Results for "human reference genome"
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CSBB is a command line based bioinformatics suite to analyze biological data acquired t...ks like performing upper-quantile normalization on expression data or convert genome wide gene expression to z-sco...2879 days ago
Bioinformatics tools and software
USEARCH >Extreme high-throughput sequenc...nce detection. PILER >De novo genome repeat finder. PILER-CR >...ection of CRISPR repeats in bacterial genomes. QSCORE >Compare two...me alignment. PREFAB >Protein Reference Alignment Database. M...2873 days ago
- Scarpa is a stand-alone scaffolding tool for NGS data. It can be used together with virtually any genome assembler and any NGS read ma...
2865 days ago
- Function WiseScaffolder is a stand-alone semi-automatic application for genome scaffolding of pre-assembled conti...
2865 days ago
- FQC is software that facilitates quality control of FASTQ files by carrying out a QC protocol u...he dashboard groups samples in dropdowns for navigation among the data sets, utilizes human-...
1284 days ago
- Genome STRiP (Genome STRucture In Populations) is a suite...using data from multiple individuals.Genome STRiP looks both across and within a set of sequenced genomes to detect variation. The met...ts, but the method gains power across genomes and processing more genomes...
2810 days ago
- ...ram for convenient conversion of genome coordinates (or annotation f...fferent assemblies (such as Human hg18 (NCBI36) <>&...CrossMap is designed to liftover genome coordinates between assemblie...rogram for aligning sequences to reference genome. We do not recomme...
2811 days ago
- Bambus 2.0, the second generation Bambus scaffolder available as an open sou...specified by mate-pairs. Such sources of information include alignment to a reference genome (Bambus can directly use the...
2831 days ago
- OrganellarGenomeDRAW is dedicated to convert genetic information stored in GenBan...or the creation of high-quality, detailed circular maps of organellar genomes like the plastid genome (plastome) or the mitochondri...
2831 days ago
- KisSplice is a software that enables to analyse RNA-seq data with or without a reference genome. It is an exact local transcript...post-treatment depends on the availability of a reference genome/transcriptome and on the need...
2831 days ago
