Results for "idea"

Bio-Scripts

  • Install ATOM editor on Elemantory OS / Ubuntu

    ...download/deb (base) bioqueen@bioqueen-Lenovo-ideapad-320-15ISK:~/Downloads/$ su...kages in it (base) bioqueen@bioqueen-Lenovo-ideapad-320-15ISK:~/Downloads/$ ap...environment) like Eclipse, PyCharm or IntelliJ IDEA etc? (base) bioqueen@bioqu...

    1181 days ago

  • Estimate Genome Size

    # Count k-mer occurrence using Jellyfish 2.2.6 jellyfish count -t 8 -C -m 19 -s 5G -o 19mer_out --min-qual-char=? sread_1.fastq sread_2.fastq # points for a histogram jellyfish histo -o 19mer_out.histo 19mer_out #Plot results using R ##load the data into dataframe19 dataframe19

    2269 days ago

  • Simulate the reads !

    ...bmap-38.86/reformat.sh \ in=illumina1.fastq.gz in2=illumina2.fastq.gz out=illumina.int.fastq 2>/dev/null # use KmerGenie 1.7051 to get an idea of k-mer with that produces l...

    933 days ago

  • Bash script to simulate a genome !

    ...bmap-38.86/reformat.sh \ in=illumina1.fastq.gz in2=illumina2.fastq.gz out=illumina.int.fastq 2>/dev/null # use KmerGenie 1.7051 to get an idea of k-mer with that produces l...

    923 days ago