3957 days ago
Useful Publications and Websites for Deep Sequencing Data Analysis
...ll Text From RNA-seq reads to differential expression results. Oshlack et al, Genome Biol 11(12):220, 2010 Full Text DEGseq: an R package for identifying differentially expressed gene...3794 days ago
List of In-silico Binding Site Prediction Tools
...ication of ligand binding sites. Abstract: Computational methods for identifying and predicting functional sit...olumbia.edu/honiglab/screen2/cgi-bin/screen2.cgi is a tool for identifying protein cavities and computin...3759 days ago
Next generation sequencing in R or bioconductor environment
...s. Documentation BayesPeak BayesPeak is a peak calling package for identifying DNA binding sites of proteins...yesPeak package in order to compare the results from both methods by identifying their consensus peak set. Doc...3639 days ago
Commercial and public next-gen-seq (NGS) software
...ti T Tammi at the National University of Singapore. Perl/R. FindPeaks - perform analysis of ChIP-Seq experiments. It uses a naive algorithm for identifying regions of high coverage, whi...3534 days ago
Apps for Busy Bioinformatics Researchers !!!
...o linked to genes. More @ https://itunes.apple.com/us/app/geneindex/id319769866?mt=8 Genome Voyager: iPad Gain first hand experience identifying the genomic basis of disease...3556 days ago
Software packages for next gen sequence analysis
...T Tammi at the National University of Singapore. Perl/R. * FindPeaks - perform analysis of ChIP-Seq experiments. It uses a naive algorithm for identifying regions of high coverage, whi...3257 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
...Annotation, Analysis, and Search Tool; probabilistic search tool for identifying damage genes and the disease...r) Input: List of called SNVs and corresponding BAM Output: Report identifying block of mutation within codo...2924 days ago
Worldwide funding agencies to fund your bioinformatics research !!
...;The focus of the Hereditary Disease Foundation is on Huntington’s disease. Support will be for research projects that will contribute to identifying and understanding the basic d...2953 days ago
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