Results for "ids"
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Comment on "Sibelia: A comparative genomics tool"
...ls. Blocks coordinates ------------------ File name = "blocks_coords.txt". First part of this file lists input sequences, their IDs, sizes and descriptions. IDs are just index numbers of seq...1298 days ago
Comment on "List of gene ontology software and tools"
GeneSCF serves as command line tool for clustering list of genes based on functional annotation (Geneontology, KEGG, REACTOME and NCG). This tool requires gene list in the form of Entrez Gene IDs or Official gene symbols as a input. http://genescf.kandurilab.org/1505 days ago
Comment on "Extract fasta sequence from a multifasta file with fasta header Ids"
...ile. Assuming that you have one sequence identifier per line in the file ids.file, then you can use this o...perl -ne 'if(/^>(\S+)/){$c=$i{$1}}$c?print:chomp;$i{$_}=1 if @ARGV' ids.file fasta.file...1923 days ago
- ... GeneSCF, it is really useful. I am dealing with new genome, with priliminary annotations. The annotated ids are not universally accepted. Once I tried to convert the ids/sequence by matching online d...
2648 days ago
