Results for "input"
Blogs
...e for a specific taxon based on sequence homologs in other species. The input is a multiple sequence alignm...data, and can also obtain an estimation of ancestral genomes, given an input tree. MLGO takes the advantag...2539 days ago
BBTools for bioinformatician !
...red" to keep output reads in the same order as input reads Finding reads with a...mbol gets replaced by the barcode; in both the input and output names, the "#" sym...can also give a custom prefix if you want. The input has to be text format, not .d...2279 days ago
Insert data through ajax into MySql database.
...lt;/script> <form method="post" action="" name="frm"> Name:<input type="text" name="name" id="name" value=""><br> Email:<input type="text" name="email" id="...2210 days ago
- ...2) Convert dbSNP rs number from one build to another (3) Convert both genome position and dbSNP rs number over different versions Run: liftOver input.bed hg18ToHg19.over.chain.gz...
2169 days ago
- ...aired reads and # you expect high gene density with UTR # overlap (use FASTQ input file format #...
2142 days ago
Converting a VCF into a FASTA given some reference !
...q (lines 469-528) This script has been modified by others to convert InDels as well, e.g. this by David Eccles ./vcf2fq.pl -f <input.fasta> <all-site.vcf>...2125 days ago
CANU genome assembly parameters !
...ng. The output directory contains will contain many files. The most interesting ones are: *.correctedReads.fasta.gz : file containing the input sequences after correction, t...1954 days ago
- ...cho foobar"); # => prints foobar # Reads a line from standard input and stores in localvar g...erns are used only if you're processing lines from files or standard # input. # # When you pass argument...
1844 days ago
List of perl special symbols !
...ent file @ARGV – command line arguments $ARGV – special file handle for command line filenames $. – current line number $/ - input line delimiter $\ - output l...1568 days ago
Run bash script in Perl program !
...5.a2p syntax: a2p [options] [awkscript] There is a Perl utility known as a2p which translates awk command to Perl. It takes awk script as input and generates a comparable Pe...646 days ago
