Results for "integrate"
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Assembly and diploid architecture of an individual human genome via single-molecule technologies
The research work shows that it is now possible to integrate single-molecule and high-throughput sequence data to generate de novo assembled genomes that approach reference quality. h...3235 days ago
CISA: Contig Integrator for Sequence Assembly
...mploy various state-of-the-art assemblers to generate different sets of contigs for bacterial genomes. A tool, named CISA, has been developed to integrate the assemblies into a hybrid...2713 days ago
ChromHMM: Chromatin state discovery and characterization
ChromHMM is software for learning and characterizing chromatin states. ChromHMM can integrate multiple chromatin datasets such as ChIP-seq data of various histone modifications to disc...2588 days ago
GraphMap - A highly sensitive and accurate mapper for long, error-prone reads
......and much more.GraphMap is also used as an overlapper in a new de novo genome assembly project called Ra (https://github.com/mariokostelac/ra-integrate).Ra attempts to create de nov...2539 days ago
Rectangle Graph for Repeat Resolution in Genome Assembly
...ndependently of SPAdes. Although RGM differs from the current implementation of the rectangle graph approach in SPAdes, in the future we plan to integrate RGM in SPAdes. RGM can be run...2334 days ago
GLEAN: an unsupervised learning system to integrate disparate sources of gene structure evidence
GLEAN is an unsupervised learning system to integrate disparate sources of gene structure evidence (gene model predictions, EST/protein genomic sequence alignments, SAGE/peptide tags, etc) to produce a consensus gene prediction, without prior training.2179 days ago
- ...ACOA can be easily installed and run on a desktop computer, therefore allowing researchers to locally analyze their metagenomic sequence data or integrate it into their pipelines.
2196 days ago
LSC :a long read error correction tool
Getting Started These simple steps will help you integrate LSC into your transcriptomics analysis pipeline. Read the LSC_requirements for running LSC. Download and...2118 days ago
mmgenome: Tools for extracting individual genomes from metagneomes
...itates effortless integration with additional data sources and hence should not be seen as "yet another binning method", but rather a package to integrate different binning strategies....2110 days ago
- ...ene Network Construction Kit) is a comprehensive online tool kit that integrate various statistical methods t...on-, likelihood-, Bayesian- and mutual information-based methods) and integrates the resulting networks from...
1951 days ago
