Rainbow: an integrated tool for efficient clustering and assembling RAD-seq reads
Rainbow is developed to provide an ultra-fast and memory-efficient solution to clustering and assembling short reads produced by RAD-seq. First, Rainbow clusters reads us...2023 days ago
OrthoANI: An improved algorithm and software for calculating average nucleotide identity
...ate OrthoANI values between genomes of interest without unfamiliar Command Line Environments. Moreover, the OAT_cmd command-line software can be integrated into preexisting bioinformati...1969 days ago
1964 days ago
GenoViz: Visualization software for genomics
...a visualization and data sharing in genomics. Our flagship product is Integrated Genome Browser (IGB).For more...d to a new git repository at http://www.bitbucket.org/lorainelab/integrated-genome-browser. We are still...1948 days ago
RaGOO: Fast Reference-Guided Scaffolding of Genome Assembly Contigs
...ing takes ~2 minutes. Intact ordering and orienting of contigs. Chimeric contig correction GFF lift-over Structural variant calling with and integrated version of Assemblytics Conf...1842 days ago
ITIS: the Integrated Taxonomic Information System!
ITIS, the Integrated Taxonomic Information System! Here you will find authoritative taxonomic information on plants, animals, fungi, and microbes of North America and the worl...1707 days ago
RaGOO: Fast Reference-Guided Scaffolding of Genome Assembly Contigs
...calling takes ~2 minutes. Intact ordering and orienting of contigs. Misassembly correction GFF lift-over Structural variant calling with and integrated version of Assemblytics Conf...1650 days ago
EFS: an ensemble feature selection tool implemented as R-package and web-application
...hods and combines their normalized outputs to a quantitative ensemble importance. Currently, eight different feature selection methods have been integrated in EFS, which can be used sep...1557 days ago
DMINDA2: an integrated web server for DNA motif identification and analyses
DMINDA (DNA motif identification and analyses) is an integrated web server for DNA motif identification and analyses More at http://bmbl.sdstate.edu/DMINDA2/ https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4086085/1551 days ago
1546 days ago