Results for "iontorrent data"
Top-level pages
Tools for bacterial whole genome annotation
RAST – Web tool (upload...es the subsystems in the SEED database and provides detaile...apable of processing a larger data volume. NCBI's annotati...umbers to the user's sequence data by BLAST searches, respective...hine and supported by updated databases will enable biologists t...2343 days ago
Bioinformatics Web Application Development with Perl
Perl's second wave of adoption came from the growth of the w...le DBI module has been the focal point of database access since its inventio...it to provide the same interface to huge relational databases and flat files alike thr...2333 days ago
List of visualization tools for network biology
Network analysis is any structured...ttp://www.arena3d.org Biana Data integration and network manag...equence, regulatory and other data http://www.biologicalnetwork...ulb.ac.be/neat/ Ondex Data integration and visualization...manually and import external data http://tinyurl.com/yEdGraph/...2300 days ago
List of visualization tools for genome alignments
Genome browsers are useful not only...g analysis protocols, testing data quality, and generating resul...e assembly and associated metadata http://www.bcgsc.ca/platform...t-generation sequencing (NGS) data and the results of analyses w...d visualization of sequencing data http://wanglab.ucsd.edu/star...2296 days ago
Awk for Bioinformatician and computational biologist
Awk is a programming language which allo...ted by semicolon.Say you have data.tsv with the following conten...m the file. $ awk '{print;}' data/test.tsvcontig1 ACTGTCTGTCACT...1","$2;}END{print "-------"}' data/test.tsvHeader,Sequencecontig...TTTATATATT You can also store data in the memory with the syntax...2292 days ago
Computational resources for TE discovery and TE detection
Transposable Elements (TEs) to genome structure and evolution as well as their impact on...life.fudan.edu.cn/ltr_finder/ LTR_STRUC http://www.genetics.uga.edu/retrolab/data/LTR_Struc.html LTR_MINER ht...2286 days ago
Webinar on RNA-Seq Data Analysis on 28 Feb 2018
Strand NGS is a biologist friendly NGS a...s biologists to analyze their data using a very intuitive workfl...and visualization of RNA-Seq data. This webinar will give an ov...supports large scale RNA-Seq data analysis too. The tool also s...and leaves more time for end data interpretation. This webinar...2276 days ago
Python learning resources for bioinformatics and computational biologist !
Python is a general-purpose language, which mean...is great for backend web development, data analysis, artificial intellig...ython Composing Programs (3.x) Data Structures and Algorithms in...Problem Solving with Algorithms and Data Structures using Python ...2267 days ago
Some useful Bioinformatics links
Reference-free prediction of rearrangement brea...-free SNP detection: dealing with the data deluge https://www.ncbi.nlm....sualization of Multidimensional Omics Data https://www.ncbi.nlm.nih.gov...e novo using only nanopore sequencing data | Nature Methods https://www...2253 days ago
Installing Bio::SCF perl module
Most Perl modules are written in Perl, some use XS (.../libread.a'make[2]: Nothing to be done for 'install-data-am'.make[2]: Leaving director...trace_dump'make[2]: Nothing to be done for 'install-data-am'.make[2]: Leaving director...2230 days ago
