Barrnap: Bacterial ribosomal RNA predictor
...tyle. NHMMER binaries for 64-bit Linux and Mac OS X are included and will be auto-detected. Multithreading is supported and one can expect roughly linear speed-ups with more CPUs.&nbs...2553 days ago
2931 days ago
CGView - Circular Genome Viewer
...using a powerful pan-and-zoom interface, or GView can write static images of a genome to a file. GView can draw a genome using either circular or linear layouts. For examples of some...2788 days ago
GenomeRing: alignment visualization based on SuperGenome coordinates
...eaningful manner are needed to help researchers gain new insights into the underlying data. Such visualizations typically are either realized in a linear fashion as in genome browsers...2666 days ago
2637 days ago
slacTree: SVG Large Annotated Circular Tree drawing
...very small representations of entire trees or highly magnified regions with unlimited resolution Circular and radial trees are more compact than linear representations ...2501 days ago
2490 days ago
RGFA: powerful and convenient handling of assembly graphs
...to conveniently parse, edit and write GFA files. Complex operations such as the separation of the implicit instances of repeats and the merging of linear paths can be performed. A typ...1570 days ago
LAMSA: fast split read alignment with long approximate matches
..., LAMSA initially splits the read into relatively long fragments and co-linearly align them to solve the sma...ming (SDP)-based split alignment approach to handle the large or non-co-linear variants. We benchmarked L...2185 days ago
GWASpro: A High-Performance Genome-Wide Association Analysis Server
...design matrices, by which complex experimental designs that may include replications, treatments, locations and times, can be accounted for in the linear mixed model (LMM). GWASpro is...1979 days ago