Results for "long reads"

Wire posts

  • Genome Mapping #OneLiner https://bioinformaticsonline.com/snippets/view/39310/one-liner-for-reads-mapping

    1840 days ago

  • ELECTOR: EvaLuator of Error Correction Tools for lOng Reads https://github.com/kamimrcht/ELECTOR #ELECTOR #Evaluation #Correction #Error #Evaluator

    1807 days ago

  • Nanopore sequencing and #assembly of a human genome with ultra-long reads https://www.nature.com/articles/nbt.4060

    1791 days ago

  • #Estimate the #insert #size with mapped reads $ head -10000 mappings.sam | awk '{ if ($9 > 0) { N+=1; S+=$9; S2+=$9*$9 }} END { M=S/N; print "n="N", mean="M", stdev="sqrt ((S2-M*M*N)/(N-1))}'

    1635 days ago

  • #Improving draft #assemblies by iterative mapping and #assembly of short reads to eliminate #gaps https://genomebiology.biomedcentral.com/articles/10.1186/gb-2010-11-4-r41

    1565 days ago

  • Minimizer-space de Bruijn graphs: Whole-genome assembly of long reads in minutes on a personal computer https://www.cell.com/cell-systems/fulltext/S2405-4712(21)00332-X #msDBG #Assembly #Genome

    974 days ago

  • #HAIRSPLITTER: SEPARATING NOISY LONG READS INTO AN UNKNOWN NUMBER OF #HAPLOTYPES https://hal-insa-rennes.archives-ouvertes.fr/hal-03817928/

    553 days ago