Results for "longreads"
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SSPACE_longread complain for getopts.pl file. To resolve this, download and have in SSPACED-Longreads folder. Cheers :)2166 days ago
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- ....gz', 'test/600_1.fq.gz', 'test/600_2.fq.gz'], identity=0.51, iters=2, joins=5, limit=0.2, linkratio=0.7, log=', mode 'w' at 0x7f85d1de31e0>, longreads=[], mapq=10, mem=16, minLengt...
2205 days ago
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Bio-Scripts
Long reads mapper bash script !
...rameters accepted toolName=$1 refFasta=$2 longReads=$3 thread=$4 readsType=$5...ndex $refFasta $bwaMemLoc mem $refFasta $longReads -t $thread > $fileName.out.sa...en $minimap2Loc -ax map-ont $refFasta $longReads -t $thread > $fileName.out.sa...2137 days ago
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- This tutorial includes resources for learning more about PacBio data and bioinformatics analysis, and includes content suitable for both beginners and experts. Below are links to training modules (webinars and PowerPoint presentations) to help you get started with your data processing, as well as...
Tags: Bioinformatics, Analysis, Assembly, Genome, PacBio, LongReads, Reads
2642 days ago
Pacbio Long Reads Compatible Software and Tools
The following software packages are known to be compatible with PacBio® data, in addition to PacBio's own SMRT® Analysis suite. All packages are believed to be open source or freely available for non-commercial use. See the individual project sites for up-to-date license information. A se...Tags: Bioinformatics, Chromosome, Genome, NGS, Align, LongReads, LR, Reads, Pacbio
2623 days ago
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