Perl Special Vars Quick Reference
...ugging flags. See use re 'debug'; ${^RE_TRIE_MAXBUF} Control memory allocations for RE optimizati...I Value of the -i (inplace edit) switch. $^M Emergency Memory pool. $^P Internal vari...2636 days ago
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Linux Commands Cheat Sheet for Bioinformatics and Computational Biology Professionals
...command — show the manual for command df — show disk usage du — show directory space usage free — show memory and swap usage whereis app&nb...2273 days ago
Awk for Bioinformatician and computational biologist
...TCTGTCACTGTGTTGTGATGTTGTGTGTGcontig2 ACTTTATATATTcontig3 ACTTATATATATATAcontig4 ACTTATATATATATAcontig5 ACTTTATATATT You can also store data in the memory with the syntax VARIABLE_NAME...2272 days ago
Some useful Bioinformatics links
...ware/tips.html Omega | Overlap-graph de novo Assembler for Metagenomics https://omega.omicsbio.org/ abiswas-odu/Disco: Multi-threaded Distributed Memory Overlap-Layout-Consensus (OLC...2234 days ago
Installing Bio::SCF perl module
...compatible... yeschecking for sys/types.h... yeschecking for sys/stat.h... yeschecking for stdlib.h... yeschecking for string.h... yeschecking for memory.h... yeschecking for strings....2211 days ago
LINKS scaffolder bloomfilter setting !
...DO NOT SUPPLY A BLOOM FILTER, ONE WILL BE CREATED (.bloom) -p Bloom filter false positive rate (default -p 0.001, optional; increase to prevent memory allocation errors) -x Turn...2143 days ago
Bioinformatics tools for genome assembly !
...Long Read (SPAdesLR): An extension of SPAdes for long-read data, such as those from PacBio or Nanopore. Minia: An assembler optimized for low memory consumption, suitable for sma...278 days ago