Results for "metagenome"
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...deletions, genome rearrangements and chimeric assemblies presented in metagenomes. At the genome level with re...e-independent and statistically rigorous measure of single genome and metagenome assembly accuracy, which can...2923 days ago
- ...mples of DNA from uncharacterized environments that may contain hundreds or even thousands of species. One of the main challenges in analyzing a metagenome is phylogenetic classificatio...
2756 days ago
- ...etagenomic sequences to deconvolute complex microbial communities, or metagenome binning, enables the study of...dual organisms and their interactions. Here we developed an automated metagenome binning software, called Meta...
2609 days ago
- ...ts and tutorials on how to assemble individual microbial genomes from metagenomes, as described in: Genome se...ltured bacteria obtained by differential coverage binning of multiple metagenomesMads Albertsen, Philip Hugenh...
2612 days ago
- ...o assemble individual microbial genomes from metagenomes, as described in: Genome se...by differential coverage binning of multiple metagenomes Mads Albertsen, Philip Huge...ion. https://github.com/MadsAlbertsen/multi-metagenome
2601 days ago
gbtools: Interactive Visualization of Metagenome Bins in R
We have developed gbtools, a software package that allows users to visualize metagenomic assemblies by plotting coverage (sequencing depth) and GC values of contigs, and...2589 days ago
Metagenomics assembly workshop !!
Welcome to the one-day metagenomics assembly workshop. This tutorial will guide you through the typical steps of metagenome assembly and binning. The Tutorial Data Set FastQ...2566 days ago
- ...enetic characterization when whole genome or 16S rRNA gene information is not available. For example, a partial genomic fragment obtained from a metagenome can be identified by TNA (Tee...
2550 days ago
Omega2: metagenome assembly pipeline
Omega found overlaps between reads using a prefix/suffix hash table. The overlap graph of reads was simplified by removing transitive edges and trimming short branches. U...2483 days ago
- ...ed and multiprocess distributed memory overlap-layout-consensus (OLC) metagenome assembler. Disco was developed as a scalable assembler to assemble large metagenomes from billions of Illumina se...
2483 days ago
