Results for "motifs"
Tags
MCAT: Motif Combining and Association Tool
This is a pipeline for finding motifs in fasta files.It can be run from the command line as follows: usage: orange_pipeline_refine.py [-h] [-w W] [--nmotifs NMOTIFS] [--iter ITER] [-c C][-s S] [-d] [-ff] [-v V]positive_seq negative_seq positional arguments:positive_seq the fasta file for the po...Tags: pipeline, find, motifs, fasta
1932 days ago
ChIPBase: open database for studying the transcription factor binding sites and motifs
ChIPBase v2.0 is an open database for studying the transcription factor binding sites and motifs, and decoding the transcriptional regulatory networks of lncRNAs, miRNAs, other ncRNAs and protein-coding genes from ChIP-seq data. Our database currently contains ~10,200 curated peak datasets derive...Tags: ChIPBase, open, database, studying, transcription, factor, binding, sites, motifs
851 days ago
