Latest paper on comparison of mapping tools
...rnals.org/content/28/24/3169 Some new Mapping tool links: GSNAP http://research-pub.gene.com/gmap/ RMAP http://rulai.cshl.edu/rmap/ mrsFAST http://mrsfast.sourceforge.net/Home http://...3896 days ago
Seal: SEquence ALignment evaluation suite
...mputing run times and measures of accuracy. Seal has interfaces to evaluate the following software packages: Bowtie BWA MAQ mrFAST mrsFAST Novoalign SHRiMP SOAPv2...2313 days ago
Commercial and public next-gen-seq (NGS) software
...Support for Roche FLX, Illumina, SOLiD, and Helicos. Written by Michael Strömberg at Boston College. Win/Linux/MacOSX MrFAST and MrsFAST - mrFAST & mrsFAST are designed to map short rea...3518 days ago
Software packages for next gen sequence analysis
...upport for Roche FLX, Illumina, SOLiD, and Helicos. Written by Michael Strömberg at Boston College. Win/Linux/MacOSX * MrFAST and MrsFAST - mrFAST & mrsFAST are designed to map short rea...3242 days ago
Latest paper on comparison of mapping tools
A. Hatem, D. Bozdag, A. E. Toland, U. V. Catalyurek "Benchmarking short sequence mapping tools" BMC Bioinformatics, 14(1):184, 2013. http://bmi.osu.edu/hpc/software/benchmark/ http://bmi.osu.edu/hpc/software/pmap/pmap.html Other similiar papers: http://online.liebertpub.com/doi/pdf/10.1089/cm...Tags: Sequencing, short reads mapping, SNP, GSNAP, BWA, Bowtie, BWA, mrsFAST
3896 days ago