3944 days ago
3944 days ago
Useful Publications and Websites for Deep Sequencing Data Analysis
...is methods.] Optimization of de novo transcriptome assembly from next-generation sequencing data. Surget-Groba...uencing Genome-wide genetic marker discovery and genotyping using next-generation sequencing. Davey et al., Nat...3776 days ago
List of bioinformatics open source projects/software.
...ed bioinformatics tools Visomics bioinformatics tools for omics data Genome Analysis Toolkit 1.0 (GATK 1.0) a software package to analyse next-generation resequencing data3753 days ago
List of generic simulation software/tools/resource with brief description and homepage !!!
List of generic simulation software/tools/resource with brief description and homepage ALF A Simulation Framework for Genome Evolution http://www.cbrg.ethz.ch/alfBayesia...3734 days ago
Next generation sequencing in R or bioconductor environment
There are many R software and bioconductor packages for NGS data analysis, some of them are as follows Biostrings The Biostrings package from Bioconductor provides an adv...3621 days ago
Commercial and public next-gen-seq (NGS) software
...ec. C/Perl for Unix. gnumap - The Genomic Next-generation Universal MAPper (gnumap) is...ccurately map sequence data obtained from next-generation sequencing machines (specific...o map millions of short reads, emerged by next-generation sequencing technology, back t...3516 days ago
Software packages for next gen sequence analysis
.... C/Perl for Unix. * gnumap - The Genomic Next-generation Universal MAPper (gnumap) is...ccurately map sequence data obtained from next-generation sequencing machines (specific...o map millions of short reads, emerged by next-generation sequencing technology, back t...3239 days ago
2710 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
Commercial tools Strand NGS offers many different tools including alignment, RNA-Seq, DNA-Seq, ChIP-Seq, Small RNA-Seq, Genome Browser, visualizations, Biological Int...2905 days ago