Rdatamining.com : R and Data Mining
...s website presents examples, documents and resources on data mining with R. Documents on using R for data mining are available to download for non-commercial personal use, including ...3924 days ago
COSMOS, our workflow management system for NGS data
...sequencing data is open-access published via Advance Access in Bioinformatics (Gafni et al. 2014). It is also available for download for non-commercial academic and research purpose...3583 days ago
UCSC Genome Browser and Blat software !
This directory contains Genome Browser and Blat application binaries built for standalone command-line use on various supported Linux and UNIX platforms. To determine which...3008 days ago
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Pacbio Long Reads Compatible Software and Tools
...th PacBio® data, in addition to PacBio's own SMRT® Analysis suite. All packages are believed to be open source or freely available for non-commercial use. See the individual proje...2617 days ago
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CrocoBLAST: Optimized parallel implementation of local sequence alignment algorithms
Local sequence alignment is a cornerstone of bioinformatics, allowing to compare the amino-acid sequences of different proteins, or the nucleotide sequences of different pi...2485 days ago
AIRVF: a filtering toolbox for precise variant calling in Ion Torrent sequencing
AIRVF that works on flowgram, raw and mapped reads and called variants to reduce artifact-driven false variant calls. Tests on sequencing data of standard reference materia...2335 days ago
LAMSA: fast split read alignment with long approximate matches
...-of-the-art long read aligners; mean-while, it also has good ability to handle various categories of SVs. LAMSA is open source and free for non-commercial use. LAMSA is mainly desig...2191 days ago