Results for "orthology"

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  • Mercator that constructs orthology maps between multiple whole genomes https://www.biostat.wisc.edu/~cdewey/mercator/ #Synteny #Orthology #Map #Construction #Alignment

    Tags: Synteny, Orthology, Map, Construction, Alignment

    3536 days ago

  • Mercator: Multiple Whole-Genome Orthology Map Construction

    Whole-genome homology maps attempt to identify the evolutionary relationships between and within multiple genomes. The term "syntenic" is often used to describe regions of multiple genomes that are believed to have evolved from the same region in an ancestral genome. However, it has been pointed ...

    Tags: Mercator, Multiple, Whole-Genome, Orthology, Map, Construction, orthologous, homologous, paralogous, Synteny, ancetral

    1441 days ago

  • UPhO: Scripts for homology and orthology assessment from genomic sequences.

    UPhO finds orthologs with and without inparalogs from input gene family trees. Refer to the Documentation.pdf for more detailed explanations on its usage, installation and dependencies. Type UPhO.py -h for help. The only input requierement for UPhO is a tree (or trees) in Newick format in which ...

    Tags: UPhO, Scripts, homology, orthology, assessment, genomic, sequences

    1932 days ago