bash script to extract sequence by ids !
...Extract fasta sequence that correspond to desired gene ids: seqtk subseq in.fasta ids.selected.txt > out.fasta cat out.fasta Output: >BGI_novel_T016697 Solyc0...817 days ago
Perl script to find inverted repeats !
...obj->seq(); # run RepeatMasker my $rm = Bio::Tools::Run::RepeatMasker->new(); my $rm_report = $rm->run($genome_file); # parse RepeatMasker output while (my $rm_result = $rm_r...419 days ago
R script to covert and export html page to png
# Library library(streamgraph) # Create data: data412 days ago
Python script to convert fastq to fasta
...e fa.write('>' + header[1:] + '\n') fa.write(sequence + '\n') # Usage example fastq_to_fasta('input.fastq', 'output.fasta')32 days ago