Results for "overlapping"
Bio-Scripts
Check overlapping range with Perl
#!/usr/bin/perl use strict; use warnings; my @ranges = 0; push @ranges, $ranges[-1] + 1 + int rand 200 for 1..10000; my @tests = map int rand $ranges[-1], 0..100...2637 days ago
Create genome scaffolding with Perl
...ences "prefix" => "psl_scaffold_", # prefix for contig names "pid" => 90, # percent ID threshold "trimlimit" => 50, # max number of overlapping bases outside match region...2318 days ago
Plot custom gene density with R
library(karyoploteR) pp2260 days ago
Generates a genome coverage plot with R
library(CoverageView) ##draw a coverage plot for a test case BAM file #get a BAM test file treatBAMfile2065 days ago
Tadpole is 250x faster than SPADes assembler !
...they are very slow for large metagenomes. Overlap parameters (for overlapping paired-end reads only): merge=f Attempt to merge overlapping reads prior to...986 days ago
