Comment on "List of non-commercial NGS genotype-calling software"
...ted paired-end and split-read analysis. [ paper-2012 ] lumpy &ndas...ework for structural variant discovery. [ paper-2014 ] manta &ndas...angement IDentification Software Suite. [ paper-2017 ]smoove &ndash...1155 days ago
Comment on "Basic command-line to run BLAST"
Original paper https://www.sciencedirect.com/science/article/pii/S00222836058036021308 days ago
Comment on "Tools to detect synteny blocks regions among multiple genomes"
...tection tool. http://www.lcqb.upmc.fr/CHROnicle/SynChro.html https://pdfs.semanticscholar.org/5320/68e328d1aaefa435eefe679f54c018e5c2aa.pdf The paper conclude: SynChro is a fast,...1607 days ago
Comment on "List of motif discovery tools !"
Motif algorithms This link on Nature explain: how does DNA sequence motif discovery work? Paper on BMC bioinformatics: survey of DNA motif finding algorithms This paper discusses some limitations and potentials of motif discovery algorithms (2005)1994 days ago
Comment on "Run miniasm assembler on nanopore reads !"
Must read paper https://genome.cshlp.org/content/27/5/737.full2180 days ago
Comment on "Structural variation: the hidden genomic treasure"
This research paper is also useful http://www.sciencedirect.com/science/article/pii/S10462023163001842706 days ago
Comment on "Structural variation: the hidden genomic treasure"
This paper https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4479793/ provide many others tools and their comparative importance.2715 days ago
Comment on "Comparative genomics educational material and papers bookmarks"
An intersting paper explaining comparative genomics in metazoan eukaryotes "COMPARATIVE GENOMICS: GENOME-WIDE ANALYSIS IN METAZOAN EUKARYOTES" https://www.cs.rice.edu/~devika/comp470/papers/ureta-vidal2003.pdf2746 days ago
Comment on "Comparative genomics educational material and papers bookmarks"
An intersting paper reviewed "An applications-focused review of comparative genomics tools: Capabilities, limitations and future challenges" http://bib.oxfordjournals.org/content/4/2/105.full.pdf2746 days ago
Comment on "Visual machine learning !!!"
Useful paper on Machine learning in bioinformatics https://bib.oxfordjournals.org/content/7/1/86.fullMachine learning in bioinformatics3006 days ago