Comment on "List of non-commercial NGS genotype-calling software"
...ted paired-end and split-read analysis. [ paper-2012 ] lumpy &ndas...ework for structural variant discovery. [ paper-2014 ] manta &ndas...angement IDentification Software Suite. [ paper-2017 ]smoove &ndash...1142 days ago
Comment on "Basic command-line to run BLAST"
Original paper https://www.sciencedirect.com/science/article/pii/S00222836058036021295 days ago
Comment on "Tools to detect synteny blocks regions among multiple genomes"
...tection tool. http://www.lcqb.upmc.fr/CHROnicle/SynChro.html https://pdfs.semanticscholar.org/5320/68e328d1aaefa435eefe679f54c018e5c2aa.pdf The paper conclude: SynChro is a fast,...1594 days ago
Comment on "List of motif discovery tools !"
Motif algorithms This link on Nature explain: how does DNA sequence motif discovery work? Paper on BMC bioinformatics: survey of DNA motif finding algorithms This paper discusses some limitations and potentials of motif discovery algorithms (2005)1982 days ago
Comment on "Run miniasm assembler on nanopore reads !"
Must read paper https://genome.cshlp.org/content/27/5/737.full2167 days ago
Comment on "Structural variation: the hidden genomic treasure"
This research paper is also useful http://www.sciencedirect.com/science/article/pii/S10462023163001842694 days ago
Comment on "Structural variation: the hidden genomic treasure"
This paper https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4479793/ provide many others tools and their comparative importance.2703 days ago
Comment on "Comparative genomics educational material and papers bookmarks"
An intersting paper explaining comparative genomics in metazoan eukaryotes "COMPARATIVE GENOMICS: GENOME-WIDE ANALYSIS IN METAZOAN EUKARYOTES" https://www.cs.rice.edu/~devika/comp470/papers/ureta-vidal2003.pdf2733 days ago
Comment on "Comparative genomics educational material and papers bookmarks"
An intersting paper reviewed "An applications-focused review of comparative genomics tools: Capabilities, limitations and future challenges" http://bib.oxfordjournals.org/content/4/2/105.full.pdf2733 days ago
Comment on "Visual machine learning !!!"
Useful paper on Machine learning in bioinformatics https://bib.oxfordjournals.org/content/7/1/86.fullMachine learning in bioinformatics2993 days ago