Comment on "List of non-commercial NGS genotype-calling software"
...ted paired-end and split-read analysis. [ paper-2012 ] lumpy &ndas...ework for structural variant discovery. [ paper-2014 ] manta &ndas...angement IDentification Software Suite. [ paper-2017 ]smoove &ndash...1154 days ago
Comment on "Basic command-line to run BLAST"
Original paper https://www.sciencedirect.com/science/article/pii/S00222836058036021307 days ago
Comment on "Tools to detect synteny blocks regions among multiple genomes"
...tection tool. http://www.lcqb.upmc.fr/CHROnicle/SynChro.html https://pdfs.semanticscholar.org/5320/68e328d1aaefa435eefe679f54c018e5c2aa.pdf The paper conclude: SynChro is a fast,...1606 days ago
Comment on "List of motif discovery tools !"
Motif algorithms This link on Nature explain: how does DNA sequence motif discovery work? Paper on BMC bioinformatics: survey of DNA motif finding algorithms This paper discusses some limitations and potentials of motif discovery algorithms (2005)1993 days ago
Comment on "Run miniasm assembler on nanopore reads !"
Must read paper https://genome.cshlp.org/content/27/5/737.full2179 days ago
Comment on "Structural variation: the hidden genomic treasure"
This research paper is also useful http://www.sciencedirect.com/science/article/pii/S10462023163001842705 days ago
Comment on "Structural variation: the hidden genomic treasure"
This paper https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4479793/ provide many others tools and their comparative importance.2714 days ago
Comment on "Comparative genomics educational material and papers bookmarks"
An intersting paper explaining comparative genomics in metazoan eukaryotes "COMPARATIVE GENOMICS: GENOME-WIDE ANALYSIS IN METAZOAN EUKARYOTES" https://www.cs.rice.edu/~devika/comp470/papers/ureta-vidal2003.pdf2745 days ago
Comment on "Comparative genomics educational material and papers bookmarks"
An intersting paper reviewed "An applications-focused review of comparative genomics tools: Capabilities, limitations and future challenges" http://bib.oxfordjournals.org/content/4/2/105.full.pdf2745 days ago
Comment on "Visual machine learning !!!"
Useful paper on Machine learning in bioinformatics https://bib.oxfordjournals.org/content/7/1/86.fullMachine learning in bioinformatics3004 days ago