Results for "pattern"
Bookmarks
International Conference on Bioinformatics Models, Methods and Algorithms
...terest for this community include sequence analysis, biostatistics, image analysis, scientific data management and data mining, machine learning, pattern recognition, computational ev...3515 days ago
7th International Conference on Bioinformatics and Computational Biology (BICoB)
...ted to, or with application in, bioinformatics is also encouraged including: data mining, text mining, machine learning, modeling and simulation, pattern recognition, data visualizati...3514 days ago
Pattern Searching in a Single Genome
Pattern searching holds much importance for biologists , for the understanding of DNA ( and its functionality) can be more than a matter of satisfying curiosity , but a...2996 days ago
YASS :: genomic similarity search tool
...ristic pairwise local alignment tools for DNA sequences (FASTA, BLAST, PATTERNHUNTER, BLASTZ/LASTZ, LAST ......other simple, but interesting feature is that you can specify the seed pattern used in the search step (as p...2940 days ago
- ...elizable across multiple nodes using MPI) memory efficient. (Even a single node with 16GB of ram can handle over 1Gbp of sequence) unlimited by pattern length or selection repeat t...
2789 days ago
Finding Patterns in Biological Sequences
...his report we provide an overview of known techniques for discovery of patterns of biological sequences (DNA...biological motivation, and methods of biological verification of such patterns. Finally we list publicly av...2706 days ago
splitbam: splits a BAM by chromosomes
...PTY bams for chromosome having no read mapped -m | --mock : if option '-e', add a mock pair of sam records to the empty bam -p (output file/bam pattern) REQUIRED. MUST contain ...2638 days ago
- ...t to any category. over expressed: expression levels are very high in at least 3 samples and CroCo will not try to categorize it. Indeed, such a pattern does not correspond to expect...
1960 days ago
chromosight: Computer vision based program for pattern recognition in chromosome (Hi-C) contact maps
Python package to detect chromatin loops (and other patterns) in Hi-C contact maps. Stable version with pip: pip3 install --user chromosight Stable version with conda: conda...1519 days ago
