Results for "phylogeny"
Bookmarks
7th International Conference on Bioinformatics and Computational Biology (BICoB)
...ch and clustering, function prediction, motif discovery, functional site recognition in protein, RNA and DNA sequences. Phylogenetics: Phylogeny estimation, models of evoluti...3491 days ago
FSA: Fast Statistical Alignment
...h to aligning homologous protein, RNA or DNA sequences. Much as distance-based phylogenetic reconstruction methods like Neighbor-Joining build a phylogeny using only pairwise divergenc...2637 days ago
- ...ion of whole genome, it is evident that it cannot replace other alignment-based phylogenetic methods such as OrthoANI or 16S rRNA phylogeny. However, TNA can be useful f...
2550 days ago
- ...riptomics &mdash transcript assembly, abundance estimation and differential expression testing Phylogenetics &mdash The small and large phylogeny problem; parsimony, maximum l...
2341 days ago
jobTree based python wrapper to run the genome simulation tool suite Evolver
evolverSimControl (eSC) can be used to simulate multi-chromosome genome evolution on an arbitrary phylogeny (Newick format). In addition to simply running evolver, eSC a...2332 days ago
Snippy: Rapid haploid variant calling and core SNP phylogeny
Snippy finds SNPs between a haploid reference genome and your NGS sequence reads. It will find both substitutions (snps) and insertions/deletions (indels). It will use a...2017 days ago
CBS Comparative Microbial Genomics group - BioTools download page
...ng and analyzing the diversity within the class Negativicutes, represented by 31 genomes including 10 genera. The analyses include 16S rRNA phylogeny, basic DNA and codon statisti...2075 days ago
VCF2PopTree: a client-side software to construct population phylogeny from genome-wide SNPs
...e is small. CITATION: Subramanian, S., Ramasamy, U. and Chen, D. (2019). VCF2PopTree: a client-side software to construct population phylogeny from genome-wide SNPs. ...855 days ago
GEnView: A phylogeny based comparative genomics software to analyze the genetic environment of genes
A phylogeny based comparative genomics software to analyze the genetic environment of genes. The user can select one or several taxa and provide one or several reference...852 days ago
PhyloHerb: A highâthroughput phylogenomic pipeline for processing genome skimming data
...ies tree. It is designed to be a high throughput program dealing with lower quality data. Examples include low-coverage (5x cpDNA) plastome phylogeny, recycling plastid genes from...235 days ago
