dotPlotly: Generate an interactive dot plot from mummer or minimap alignments
Create an interactive dot plot from mummer output OR PAF format R script that makes a plotly interactive and/or static (png/pdf) dot plot. Shiny app available for testing1901 days ago
plumber:An R package that converts your existing R code to a web API
...#* @param msg The message to echo #* @get /echo function(msg=""){ list(msg = paste0("The message is: '", msg, "'")) } #* Plot a histogram #* @png #* @get /plot function(){ rand <- rn...1881 days ago
DISTRUCT: a program for the graphical display of population structure
...IX or distruct from a Dos prompt in Windows. It will produce a figure using the data that are represented in the Central/South Asia K=5 plot in Science 298: 238...1869 days ago
chromoMap-An R package for Interactive Visualization and Annotation of Chromosomes
...ements (like genes,SNPs etc.) on the chromosome plot.Each chromosome is composed o...about the annotations in that locus range. The plots can be saved as HTML documen...sualizing polyploidy simultaneously on the same plot. annotating groups of elemen...1703 days ago
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shinyCircos: an R/Shiny application for interactive creation of Circos plot
...inyCircos, a graphical user interface for interactive creation of Circos plot. shinyCircos can be easily in...rovide online use to the community. Furthermore, various types of Circos plots could be easily generated an...1550 days ago
shinyChromosome:a GUI for the interactive creation of non-circular whole genome diagrams
...e diagrams developed using the R Shiny package. To create single-genome plot by aligning genome data along all chromosomes of a single genome, go to the Single-genome plot menu. To cretae two-genome p...1529 days ago
U-Plot: Genome U-Plot sample implementation
The Genome U-Plot is a JavaScript tool to visualize Chromosomal abnormalities in the Human Genome using a U-shape layout.1526 days ago
tinycov: standalone command line utility written in python to plot coverage from a BAM file
Tinycov is a small standalone command line utility written in python to plot the coverage of a BAM file quickly. This software was inspired by Matt Edwards' genome coverage plotter. To install the stable ve...1505 days ago