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Results for "polish"

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• • Rahul Nayak@rahul

  

  Nanopolis: polish a genome assembly

  Software package for signal-level analysis of Oxford Nanopore sequencing data. Nanopolish can calculate an improved consensus sequence for a draft genome assembly, detect base modifications, call SNPs and indels with respect to a reference genome and more (see Nanopolish modules, below). Quickst...

  Tags: Nanopolis, polish, ONT, nanopore, genome, assembly, ngs

  2103 days ago

• • Jit@jit.aber

  

  how to polish a genome assembly https://nanopolish.readthedocs.io/en/latest/quickstart_consensus.html #polish #nanopolish #ont #nanopore #consensus

  Tags: polish, nanopolish, ont, nanopore, consensus

  1926 days ago

• • Jit@jit.aber

  

  Katuali is a flexible consensus pipeline implemented in Snakemake to basecall, assemble, and polish Oxford Nanopore Technologies' sequencing data

  Run a pipeline processing fast5s to a consensus in a single command. Recommended fixed "standard" and "fast" pipelines. Interchange basecaller, assembler, and consensus components of the pipelines simply by changing the target filepath. Seemless distribution of tasks over local or distribute...

  Tags: Katuali, flexible, consensus, pipeline, Snakemake, basecall, assemble, polish, Oxford, Nanopore, Technology, sequencing, data

  1923 days ago

• • BioJoker@biojoker

  

  #Polishing PacBio assemblies with Arrow and Pilon https://flowersoftheocean.wordpress.com/2018/04/16/polishing-pacbio-assemblies-with-arrow-and-pilon/ #polish #Pilon

  Tags: Polishing, polish, Pilon

  1915 days ago