mojolicious: a next generation web framework for the Perl programming language.
Back in the early days of the web, many people learned Perl because of a wonderful Perl library called CGI. It was simple enough to get started without knowing much...2297 days ago
SciLifeLab tutorial for bioinformatics analysis !
...RNA-seq course 2015 October - Uppsala2016 April - Uppsala2016 October - Uppsala2017 March - Uppsala2017 November - UppsalaRNAseq tutorials R Programming Foundations for Life Scientis...2202 days ago
Many-to-many pairwise alignments of two sequence sets
...sch alignment algorithm to find the optimum alignment (including gaps) of two sequences along their entire length. The algorithm uses a dynamic programming method to ensure the alignmen...2139 days ago
LAMSA: fast split read alignment with long approximate matches
...tions or sequencing errors, and mitigate the effect of repeats. The alignments of the fragments are then used for implementing a sparse dynamic programming (SDP)-based split alignment a...2174 days ago
nQuire: a statistical framework for ploidy estimation using next generation sequencing
...nd for historical or ancient samples where intact nuclei are not preserved. It is implemented as a stand-alone Linux command line tool in the C programming language and is available at...2032 days ago
1966 days ago
Biotite: A general framework for computational biology
...n source and freely available at GitHub (https://github.com/biotite-dev/biotite). This package is simple to use especially for the beginners in programming and computationally efficient...1958 days ago
LTR_Finder: an efficient program for finding full-length LTR retrotranspsons in genome sequences.
..., LTR_FINDER tries to identify PBS, PPT and RT inside LTR pairs by build-in aligning and counting modules. RT identification includes a dynamic programming to process frame shift. For o...1931 days ago
Shouji: a fast and efficient pre-alignment filter for sequence alignment
...; We introduce Shouji, a highly parallel and accurate pre-alignment filter that remarkably reduces the need for computationally-costly dynamic programming algorithms. The first key ide...1636 days ago
Bioinformatics web development course
...develop and deploy web applications for Bioinformatics. No previous programming knowledge is assumed. By following this tutorial you will learn the fundamental concepts of programming by using scripting languages:...1634 days ago