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SATSUMA : Highly sensitive whole-genome synteny alignments.
Satsuma is a whole-genome synteny alignment program. It takes two genomes, computes alignments, and then keeps only the parts that are orthologous, i.e. following the co...2914 days ago
- ...and structural features of nucleosomes. To get started, select a histone type to explore its variants. More at http://www.ncbi.nlm.nih.gov/projects/HistoneDB2.0/index.fcgi/brows...
2893 days ago
- ...pment. Here is the acknowledgements section of our methods paper An analysis and visualization platform for 'omics data http://merenlab.org/projects/anvio Paper https://pee...
2879 days ago
- ...used at TIGR/JCVI, IGS, NYU, New York Medical College, Novartis Vaccines and University of Maryland: College Park to support a number of research projects that involve comparative geno...
2797 days ago
BLAST Ring Image Generator (BRIG)
...arisons between a large number of genomes, with a focus on handling genome assembly data. The application is available at: http://sourceforge.net/projects/brig If you have any questio...2774 days ago
- Metagenomics sequencing projects collect samples of DNA from uncharacterized environments that may conta...(bp) have until now been relatively inaccurate, requiring metagenomics projects to use older, long-read techn...
2764 days ago
Maq: Mapping and Assembly with Quality
...pping short reads to reference sequences. Maq is a project hosted by SourceForge.net. The project page is available athttp://sourceforge.net/projects/maq/. Maq is previously known...2721 days ago
- ...ur tests show that on closely related sequences RECORD outperforms more general assisted-assembly software. More at https://sourceforge.net/projects/record-genome-assembler/files...
2718 days ago
- Latest announcement on DBT India. Calls Events Projects Jobs
2708 days ago
MyPro: A seamless pipeline for automated prokaryotic genome assembly and annotation
...contig integration software. Produces more contiguous assemblies, higher N50 values and lower number of contigs. More at https://sourceforge.net/projects/sb2nhri/files/MyPro/2698 days ago
