Results for "quality check"
Top-level pages
"Bioinformatics is a science of biological predictions and analysis" -- Jitendra Narayan "The mathematical, st...by agreeing on a common atom name nomenclature. The knowledge of the structure quali...3960 days ago
Useful Publications and Websites for Deep Sequencing Data Analysis
Global overview papers Next generation quantitative genetics in plants. Jiménez-...Central Improving SNP discovery by base alignment quality. Li H, Bioinformatics 27(8):1...ormatics 26:841-842, 2010. Publisher Website Data quali...3792 days ago
List of In-silico Binding Site Prediction Tools
Following are the list of In-silico Binding Site Prediction in Proteins tools CASTp : http://sts.bioengr.uic.edu/ca...igand complexes and their corresponding apo-protein structures to evaluate the quali...3757 days ago
Next generation sequencing in R or bioconductor environment
...rtRead The ShortRead package provides input, quality control, filtering, parsing,...commended that you cache the data locally, or check versions if your code will be a...c information from Ensembl TileQC: Flow Cell Quality Visualization rtracklayer:...3638 days ago
Commercial and public next-gen-seq (NGS) software
Integrated solutions CLCbio Genomics Workbench - de novo and reference assembly of Sange...le genome shotgun assembler that can generate high quality assemblies from short reads....ines. It was designed to assign more accurate base quali...3532 days ago
Apps for Busy Bioinformatics Researchers !!!
DNAApp: DNAApp: for iPhone/iPad This is an iOS app that allows for the opening and ana...app allows you to analyze, and also determine the quality of your sequencing files. Th...app allows you to analyze, and also determine the quali...3554 days ago
A guide for complete R beginners !
...xt-Gen sequencing (bioconductor: including Bioseq group). Presentation quality graphics Save as a png, pd...Getting More Help Project Home page http://www.r-project.org/ Check out the ‘introduction t...3374 days ago
Rosalind Problem Solution with Perl
Rosalind is a platform for learning bioinformatics and programming through problem sol...I will provide solution of all the Rosalind problem with Perl for community. Check out the right sidebar for mor...3265 days ago
Software packages for next gen sequence analysis
Integrated solutions * CLCbio Genomics Workbench - de novo and reference assembly of San...le genome shotgun assembler that can generate high quality assemblies from short reads....ines. It was designed to assign more accurate base quali...3255 days ago
- Reformat is a member of the BBMap/BBTools package. It is a multipurpose tool desig...will break pairing, if the input is paired. Quality trimming (either or both ends) Quality filtering Fixed-length trimmi...reformat.sh in=x.fq out=y.fq qin=33 qout=64 Quali...
2727 days ago
