Results for "region"
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...PCR-free library. These data enable a level of completeness and continuity that was not previously possible. DISCOVAR can call variants on a region by region basis, potentially tiling an...2935 days ago
- ...nbsp; The Rearrangement Overview page describes the one or more breakpoints which make up a structural variant. A breakpoint is defined as a region or point where the sample seq...
2769 days ago
- ...DNA sequencing libraries are enriched for gene regions of interest, especially for...ame) CDS portion of the sample for each target region, and a separate file with the...he main pipeline, to also extract the intronic regions flanking each exon, investig...
2736 days ago
- ...se-grained" alignment can explore genomic rearrangements and reduce the regions to be analyzed in the next step. The latter is devoted to detailed alignment within the limited regions found in the first stage. Th...
2626 days ago
- ...amplification primers were used (e.g., to isolate a variable region of the 16S gene, or the constant regions around zinc finger binding r...B or # as done by CASAVA and adjust the probabilities in this region.4.Construct an assembled sequ...
2656 days ago
LoRDEC: a hybrid error correction program for long, PacBio reads
...rger portion of the sequence of PacBio reads is usable for detection of region of similarity with other sequ...ing the short reads, and seeks a corrective sequence for each erroneous region of a long read by traversing...2579 days ago
- NGS data are just a bunch of sequences, you have no idea which region in the genome each sequences comes from, which gene it represents...To know that you have to align the sequences...
2557 days ago
- ...fast and approximate software for mapping long reads (PacBio/ONT) or assembly to reference genome(s). It maps a query sequence against a reference region if and only if its estimated...
2332 days ago
HISAT2: a fast and sensitive alignment program for mapping next-generation sequencing reads
...ulation of human genomes, HISAT2 uses a large set of small GFM indexes that collectively cover the whole genome (each index representing a genomic region of 56 Kbp, with 55,000 indexe...2186 days ago
HALC: High throughput algorithm for long read error correction
...s the long reads to short read contigs from the same species with a relatively low identity requirement so that a long read region can be aligned to at least one contig region, including its true genome re...2154 days ago
