Results for "restriction"
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...tware pipeline for building loci from short-read sequences, such as those generated on the Illumina platform. Stacks was developed to work with restriction enzyme-based data, such as RA...3001 days ago
- ...The executables (as well as source code) for these tools are freely available here: Scaffolding using Optical Restriction MappingOptical Maps are global, ordered maps of restriction site locations in a genome. T...
2550 days ago
HiC-Pro: an optimized and flexible pipeline for Hi-C data processing
...act maps. Since version 2.7.0, HiC-Pro supports the main Hi-C protocols, including digestion protocols as well as protocols that do not require restriction enzyme such as DNase Hi-C. In...2351 days ago
- ...le supported by only one read. Performance comparison with existing tools showed that Heap achieved the highest F-scores with low coverage (7X) restriction-site associated DNA sequencin...
2217 days ago
RestrictionDigest: A powerful Perl module for simulating genomic restriction digests
RestrictionDigest can simulate the reference genome digestion and generate comprehensive information of the simulation. It can simulate single-enzyme digestion, double-en...2162 days ago
Digest: In silico restriction digest of complete genomes
...date sequenced prokaryotic genomes. When the number of fragments is bellow 50, Pulse Field gel Electrophoresis (PFGE) is simulated. A tool for restriction digest of longuser's seq...2192 days ago
