List of generic simulation software/tools/resource with brief description and homepage !!!
...methods in statistical genetics by generating samples of family data based on user...bs modifying Hudson's ms software to generate samples of DNA sequences with a biall...rward-time simulator that simulates realistic samples for genome-wide association s...3752 days ago
List of In-silico Binding Site Prediction Tools
...high clearance pathways or corridors which represent molecular channels in the complement space of proteins. It is extremely efficient because it samples the medial axis of the comple...3759 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
...NDELs from pooled high-throughput NGS, not used for analysis of single samples; implemented in C and uses SA...er alteration and loss of heterozygosity in impure and aneuploid tumor samples using whole genome sequencing...2923 days ago
Genome Assembly Tools and Software - PART1 !!
...ge eukaryotic genomes, diploid genomes, and genomes from environmental samples. Celera Assembler contributed...ration sequencing data as obtained from bulk sequencing of mixed virus samples. TAG 0.91 – Transc...2700 days ago
2504 days ago
Alignment-free sequence comparison tools available for next-generation sequencing data analysis
...p://clark.cs.ucr.edu/ FOCUS Reports organisms present in metagenomic samples and profiles their abundances...US/ GSM Estimation of abundances of microbial genomes in metagenomic samples (k-mer based) Software (Go)...2386 days ago
Single Cell RNAseq data analysis tutorial !!
...the average expression level for each gene across a large population of input cells Useful for comparative transcriptomics, e.g. samples of the same tissue from diffe...2365 days ago
Bioinformatics tools for genome assembly !
...for complex and diverse microbial communities. Ra Assembler: A metagenome assembler for long reads, designed for highly complex metagenomic samples. Please note that the fi...301 days ago