Results for "scaffolder"
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Bambus 2.0, the second generation Bambus scaffolder available as an open source package. While most other scaffolders are closely tied to a specific assembly program, Bambus accepts the output from most current...2839 days ago
- ...e synteny. pyScaf works better with contigs than scaffolds, as scaffolds are often affected by mis-assemblies (no de novo assembler / scaffolder is perfect...), which breaks...
2714 days ago
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Genome Assembly Tools and Software - PART2 !!
...ted assembly and annotation of microbial genomes from high-throughput sequence data. It is configurable so as not to be tied to any assembler or scaffolder, and is designed to run in a...2705 days ago
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...icles/PMC3921174/ sequence - download.tardigrades.org > v1 > sequence http://download.tardigrades.org/v1/sequence/ ksahlin/BESST: BESST - scaffolder for genomic assemblies https...2261 days ago
LINKS scaffolder bloomfilter setting !
➜ bin git:(master) ✗ ls -l total 68 drwxrwxr-x 3 urbe urbe 4096 Jun 15 12:15 lib -rwxrwxrwx 1 urbe urbe 65141 Jun 15 17:13 LINKS ➜ bin git:(master) ✗ pwd /home/ur...2171 days ago
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- DOWNLOAD LINK: https://github.com/BioInf-Wuerzburg/proovread/raw/master/util/blasr-1.3.1/blasr I'm running "OPERA-LG_v2.0.5/bin/preprocess_reads.pl" and have the following error: fail to open file './temporarySam' [bwa_aln_core] write to the disk... 0.09 sec[bwa_aln_core] 70778880 sequences ha...
Tags: blasr, download, scaffolder, OPERA-LG, temporarySam, genome, contigs
2171 days ago
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Comment on "Software packages for next gen sequence analysis"
...a tool for quality assessment and scaffolding of genome assemblies with Whole Genome Profiling™ Data MaGuS (Map-GUided Scaffolding) is a scaffolder and a reference-free evaluato...2928 days ago
